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v18 (has the current hierarchy of the brain areas stated in the "ontology" JSON):
Amunts, K., Eickhoff, S. B., Caspers, S., Bludau, S., & Mohlberg, H. (2019). Whole-brain parcellation of the JuBrain …
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Would be good to have the option of using parcellation files that include eye balls.
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e.g., http://neurovault.org/images/3391/
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### Summary & Actual behavior
Motion correction (using fsl.MCFLIRT) in a workflow returns `TypeError: can't pickle instancemethod objects`.
I have tried splicing apart each section of the workf…
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### Description of issue
Hi,
I'm trying to produce some null distributions of parcellated data and have run into an issue. The atlas file I have has 70 region and is in MNI space. When I parcellat…
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### Description of issue
Hi,
I am currently trying to integrate neurompas into my meta-analysis. However, I have the problem that when I use the meta-analytical maps, it does not show me a boxplot…
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Dear Darren,
unfortunately the most recent version of mni2fs does not work for me. When trying to run it (e.g. run_example.m), I get the following error:
```
Error using read_gifti_file_standa…
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## Open Questions
### Modelling/Dimensionality Reduction
- [ ] Decide how will we want to deal with 3D data (vectorized, 2D, or 3D matrices)
- [ ] Determine network capacity (N layers; size; ty…
gkiar updated
5 years ago
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Relates to
- #636
as
```
yoh@typhon:/mnt/DATA/data/yoh/1076_spacetop$ podman run -it --rm -v $PWD:$PWD:ro afni/afni_cmake_build:AFNI_23.1.10 -- @afni_refacer_run -input $PWD/sub-0001/ses-01/…
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Maybe we should add some QC functions to allow users to check basic informations about their input images.
The first method I would like to implement is a background noise calculation method. It would…