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Hello,
Looks like this one is not yet resolved but I cannot find any open ticket. See for example:
http://amigo.geneontology.org/amigo/gene_product/UniProtKB:T1ESS4
This gene has IBA annota…
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This is related to: https://github.com/explodinggradients/ragas/issues/681
**Describe the bug**
TestGeneration launches an error with default example of https://docs.ragas.io/en/stable/concepts/te…
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Hello I'm JeongSoo Na Syntekabio in South Korea.
I have a question about how to use it.
When I wrote this command,
`python3 -m inference --protein_ligand_csv /tmp/input_protein_ligand.csv --out_d…
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Hi !
I have a couple of questions related to the HUgging Face models.
Base on the task avaialbe in the deepchem wrapper. Is not possible to perform task like text-generation of this kind of exam…
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Dear Khalak,
I found there are many clashes when aligning the decoupled structures of ligands in solvent into the apo state pocket. And some of them cannot be solved by just do a minimization and t…
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It would be nice to have a site map for the eppic web. It would give more visibility for the crawlers and potentially somehow direct to the individual pdb pages if typing "eppic 1smt" in the search en…
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- [x] I believe this to be a bug with Open Babel
- [ ] This is a feature request
## Environment Information
Open Babel version: Open Babel 2.4.1 3.1.0 and 3.1.1
Operating system and version: Lin…
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I would like to propose a feature to correct the rotamers, mainly asparagine, glutamine and histidines while working with protein models. Jimmy proposed the use of https://flipper.services.came.sbg.ac…
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Date: Monday 13th Nov 2023
Time: 5pm BST ([other times](https://www.timeanddate.com/worldclock/meetingdetails.html?year=2023&month=11&day=13&hour=17&min=0&sec=0&p1=233&p2=136&p3=37&p4=771&p5=235&p6=1…
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I would like to suggest replacing the boolean representation of GPR associations with a true Gene-Protein-Reaction association schema.
Here are few reasons for this:
1. Gene expression is not bo…