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Set up from installer, GUI can't run reprounzip (`find_command()` fails).
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@oesteban @effigies @chrisfilo @djarecka
i would like to change nipype's container generation and testing using the following approach:
1. generate dockerfiles using neurodocker
2. check if do…
satra updated
7 years ago
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since docker has the ability to overwrite files within the container, we are running into weird issues that would benefit from better container creation. turns out certain python pieces want to write …
satra updated
6 years ago
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Hello, I am using `reprozip combine` to combine multiple traces. The output config.yml file has the key `additional_patterns`, which to my knowledge makes it non-canonical. Is this behavior intended?
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see https://github.com/freesurfer/freesurfer/issues/70 for creating a reprozip pack file.
satra updated
7 years ago
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Looks like yet another weird internal breaking change from Python:
```
Traceback (most recent call last):
File "/usr/local/bin/reprounzip", line 11, in
load_entry_point('reprounzip', 'conso…
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Hi,
I'm not sure if it is a bug or if I'm doing something wrong. But I have an issue with using jupyter notebook within a neurodocker image. If I run ``jupyter notebook`` I get the following error:…
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I can't seem to build working binaries for MacOS because OpenSSL is missing from new MacOS SDKs. Building Python proceeds without `_ssl`. Dropping the system's `_ssl.so` doesn't work because it is too…
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i downloaded the CentOS binary from freesurfer and then followed the instructions for installing the the brainstem+hippocampal subfield segmentation bits.
i also downloaded the [studyforrest data](…
satra updated
7 years ago
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In a clean virtual environment (with Python 2.7, Linux 64bit), checking out the repository and do `python setup.py install` works, but not with `pip install`.
Assuming you have installed vtk as well …