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Heya,
When I try to run cryodrgn analyze on my higher resolution dataset (256) I am getting the below error.
2024-10-02 12:10:55 Perfoming principal component analysis...
Traceback (most r…
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Due to a problem in capstone, `quokka` installation fails with Python 3.12 and 3.11.
# In Python 3.12
```shell
➜ python --version
Python 3.12.2
➜ pip install quokka-project
+ quokka-project=…
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Hi, I've been trying to run the second part (SEVtras.ESAI_calculator) of the tool, but I am getting the error below.
```
/home/kleinman/seol.song/projects/kleinman/seol.song/from_hydra/SEVtras/ven…
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Hello!
I'm trying to detect APA sites of TCGA samples via TAPAS. I followed this protocol The problem came out when I run the Step2: Diff_APA_site_analysis. Here's my code:
./Diff_APA_site_ana…
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Hi,
I'm trying to use coverage to cover tests written in unittest in a production framework, with several constraints, but it fails with this error:
` raise NoSource(f"No source for code: '{fi…
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### 🐛 Describe the bug
I'm trying to use `get_ppr`, and I thought I was just using it wrong, but I get this error, even when running the provided test function (sorry it's so long):
```python
---…
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Hi,
Please help with sorting this issue
I already reinstalled the squire package still same error
```
squire Call -1 LDN-M* -2 LDN-S* -A mutant -B sibs -i data/analysis/squire_count/ -o da…
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Summary of request: Add a new organization to ROR
Name of organization: Stichting Arab West Foundation
Website: https://www.arabwestfoundation.com
Domains: arabwestfoundation.com
Link to publica…
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I encountered a `InvalidIndexError` running the ml code during individual runs of parameter sweeps on mincostflow on the EGFR dataset. The issue happens in the `summarize_networks` function, related t…
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When I select traits with higher genetic correlation for MTAG analysis, there are a lot less significant sites in each trait in the output file. What is the reason?