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An error in registering boundary conditions should be fatal. I believe it used to be fatal, and has now become a warning. An error in applying boundary conditions usually indicates a severe inconsiste…
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As stated [here](http://www.cse.unsw.edu.au/~cs9414/15s1/tut/sol/wk04sol.html);
> There are 9 choices for the 1st move, 8 for the 2nd move, 7 for the 3rd move, etc., giving us an upper bound of 9! …
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A number of new features have been requested informally for inclusion in Nexus. This issue page serves as a space to list/discuss new features or new workflow support of priority.
As specific issu…
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As mentioned in #488, now that we have `[Element*]` meaning `Sequential`, we could define:
- `Element[]` means `List`, and
- `Item[Key]` means `Map`.
A summary of pros/cons is here:
https://github.c…
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The anatomical orientation of an array is a critical piece of metadata for downstream analysis, particularly for the increasingly common task of aligning acquired images to an atlas for anatomical qua…
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Would it be an idea to change the default simulation type to FullGaitCycle when it is detected the model is asymmetric? Doing HalfGaitCycle simulations with an asymmetric model do not make sense.
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Hi,
I am encountering an error when using your tool to with structures produced by ColabFold.
Example command used:
```
perl protocol_QSproteome_single_uniprot.pl \
--pdb OG0002542.represe…
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## Is your feature request related to a problem? ##
The MDAnalysis.analysis.rms.RMSD module will superimpose the structure based on the selection.
I think it would be better if the superimposed traj…
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https://github.com/openjournals/joss-reviews/issues/6667
I have installed the package and attempted to run the tests described in the docs (https://bayeseor.readthedocs.io/en/latest/usage.html#test…
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A lot of contracts use words for numeric values such as "three months" or "ten years" which is not currently supported in Cicero
I would like these words to be converted to numeric values in the Ci…