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I will populate this over the next few days with a branch containing already partially completed tasks and a description of what has been done.
For now I have included some notes.
# Background
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We have a bug in AET. This is shown in its annual pattern. It cannot - by definition - be larger than PET.
Run this to reproduce:
```r
library(rsofun)
library(dplyr)
library(ggplot2)
params_…
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## Purpose
Implement a big leaf model into ClimaLSM. The goal of this is to (1) have an example demonstration of a canopy model running with ClimaLSM that we can learn from when we integrate the SPAC…
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In CLM5 and prior versions, maximum hourly values of GPP are not as high as in observations at at least some tower sites, definitely at US-UMB site. See attached figures from Gretchen Keppel-Aleks. …
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Compared to the code in [calc_omega.R](https://github.com/SmithEcophysLab/optimal_vcmax_R/blob/master/functions/calc_omega.R), I get a different expression for the domain of validity for the two solut…
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### Bug Description
I'm working on runs with sensitivity analysis of ± 1 SD and `run.sensitivity.analysis()` generates plots correctly but does not save sensitivity.results.Rdata. In addition, I g…
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Long term goal
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Remove most priors from PFTs. Keep a few parameters so SA and ensemble analysis generate variation. Replace uniform priors when possible.
Params to keep:
- SLA
- Vcmax
- stomatal slope
- cut…
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Global Vcmax isnt very descriptive, doesnt really convey what this is, and doesnt contain spec.
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Hi All-
in various threads and discussions, the topic of the (autotrophic) respiration model in FATES has come up a bunch recently. right now there are a few distinct issues:
1. sapwood respiration…