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The projection algorithm used would give an unbiased result for a circular aperture without any obscurations. In the real scenario, there are obscurations and we should therefore adapt the projection …
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1. **model_zernike**
https://github.com/ratt-ru/beam-me-up/blob/master/meerkat/notebooks/model_zernike.ipynb
2. **meerkat_model_spline_fit**
https://github.com/ratt-ru/beam-me-up/blob/master/me…
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I notice there is a function `cryosparc_2_cs_ctf_parameters` that exists in the repository, but is never actually executed. I'd expected to see the function be called [somewhere here](https://github.c…
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Test and improve FeatureSets.
- [x] 2D Geometric
- [x] 3D Geometric
- [x] Statistic
- [x] Haralick
- [x] Tamura 2D (already has tests)
- [x] Zernike
- [x] Histogram (already has tests)
- [ ] …
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CASA params described here: https://open-bitbucket.nrao.edu/projects/CASA/repos/casa/browse/code/synthesis/TransformMachines/BeamCalcParams.cc
In particular:
```
struct BeamCalcGeometry all …
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Describe the process of constructing matrix H and its importance. Consult chapter 4.1 of the lecture notes. Use the Zernike polynomials created in [WFG] to test the reconstruction.
Describe the influ…
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**To Reproduce**
**For the following, first process an igram to get a wavefront. Then:**
1. Do "tools" "smooth current wave front". Before doing anything with this dialog close the app. The…
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Trying to coalesce a few things we've been discussing regarding making transforms more efficient.
## 1. Partial `basis.evaluate`
When calling `basis.evaluate` you should be able to specify which c…
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To validate the Physical Layer PSF model, we will use simulations that include a Zernike prior. Metrics and plots should be generated and compared with those reported in Tobias' thesis (section 6).
…
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## What qualifies as Freeform?
There are many answers to this question, but DWK's answer it is a surface described by an orthogonal and complete polynomial set where the constituent terms of the po…