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Command to use for dumping a portal store is (exemple for agroportal server):
> ssh centos@agroportal.lirmm.fr 'bash -s' < [bin/ontoportal_dump_data.sh](https://gite.lirmm.fr/ontoportal/ontoportal…
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We have notification (everyday) of automatic pull failure of 5/6 ontologies in AgroPortal that are connected to BioPortal.
Connected = which AgroPortal's pullLocation is a URL in BioPortal e.g.
Fo…
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Hi, there is a repository of ontology for Material Science that have been recently created: https://matportal.org
It could be interesting to add the DEBBIE ontology to this portal
This allows th…
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### Instances model
We have made a new instance model defined here https://github.com/ontoportal-lirmm/ontologies_linked_data/blob/master/lib/ontologies_linked_data/models/instance.rb
And have for n…
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For a given ontology, add a tab to visualize instances
ah will have the following URL:
http://agroportal.lirmm.fr/ontologies/TRANSMAT?p=instances
Pagination might be necessary.
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UMLS ontologies are not getting processed with AllegroGraph backend.
```
I, [2021-06-18T00:27:34.759051 #130438] INFO -- : ["Triples /srv/ontoportal/data/repository/STY/1/umls_semantictypes.ttl appe…
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AgroPortal provides an API call to get all the instances of an ontology:
For example for BIOREFINERY:
http://data.agroportal.lirmm.fr/ontologies/BIOREFINERY/instances
And for a given concept:
…
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This issue is a long term fix for problems such as the ones in #167
We need to implement a mechanism that explicitly double check that the source file downloaded is different from the source file …
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http://data.agroportal.lirmm.fr/ontologies/CO_347/latest_submission returns an error.
Repository folder shows 25 submission. The ontology has been affected by the issue reported in #167
Certainl…
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The mappings REST service fails with Allegrograph versions 7.0.2 and 7.1.0. This was tested on a Virtual Appliance with a single ontology in place, STY.
http://localhost:8080/ontologies/STY/classes…
mdorf updated
2 years ago