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I would like to update the bioconda version of kaiju so we could use the latest fixes and features. Would it be possible to tag a new release, i.e 1.5.1?
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./kaijuReport -t kaiju_db/kaiju_index/nodes.dmp -n kaiju_db/kaiju_index/names.dmp -i RefSeq_13_S28.kaiju.out.csv -r species -o RefSeq_13_S28.kaiju.out.summary
I'm getting there lines for viruses:
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Weird little note that the eclectic nature of these project names, where some (mostly pre-naming) are descriptive and some (most post-incubation) are opaque, kind of reminds me of the program listing …
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# Issue Description
Got an email from Github with text:
```
Known moderate severity security vulnerability detected in marked < 0.3.9 defined in package-lock.json.
package-lock.json update sugge…
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Hi,
I was wondering is there any technical reasons why taxonomy could not be assigned to taxonomy using this approach, not for abundance estimates, but just for taxonomic assignment?
Thanks,
Fea…
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Hello,
I'm getting an "Auto-detection of file type for file ... failed" error. I'm trying to classify reads in gzip-compressed FASTQ files. I used the same reads with Kraken without a problem.
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# Issue Description
I want to customize Demographics banner as per my requirements. Instead of Patient details, I wanted to display, Purchase Order details (e.g. Purchase Order Number, Vendor, Amou…
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Slumber currently cannot activate if either player controls a Kaiju monster. However, since it's destroying all monsters before Special Summoning, it should be allowed to activate, but resolve without…
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I see in the README that metameta will download the databases on first run.
I am preparing the software in an environment where the users do not have privileges to write where it will be installed.…
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Hi,
Thanks for Kaiju, it's very nice!
Is the SEG filtering for low-complexity sequences performed on the `nr` database when `makeDB.sh` is run? I understand that I can add this functionality to …