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Hi,
I checked your 3D lung segmentation repository and it is really amazing. We are now doing research on organ segmentation and believe your repository is a very good reference.
I see you menti…
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## Overview
Currently, when running `docker-compose -f local.yml up compile_docs`, the following errors appear:
```bash
compile_docs_1 | /app/docs/apidoc_interface/backend.api.rst:7: WARNING: t…
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I see you load data from "images_0004_0023.npy". I try to modify dicom data into .npy file, but the result is very bad.
Could you please tell me, how to make a file like "images_0004_0023.npy"
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Signing up or logging in from the URL: [http://isbichallenges.cloudapp.net/](http://isbichallenges.cloudapp.net/) to join the ISBI 2018 - Lung Nodule Malignancy Prediction, Based on Sequential CT Scan…
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Hi,
I am doing some work to show a pic generated by maftools on web server, but it seems subsetMaf() "query" argument can't get a Shiny reactive value input from web server. Below is a simple test:
…
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Could you perhaps provide a description of `val3.txt` and `train3.txt`? For instance, is the file nomenclature somehow significant?
It is not entirely clear on how one would make their own trainin…
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The plugin PTKLobes failed with the following error: Undefined function or variable 'PTKLobeMapForMRI'.
The plugin PTKLobes failed with the following error: Undefined function or variable 'PTKLobeMap…
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I'm running [this workflow](https://github.com/czbiohub/reflow-workflows/pull/3/files#diff-8f97322b36ae1295dd18955efe81f974) which uses the command `trim-low-abund.py` from [khmer](http://khmer.readth…
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Hello,
I'm using [Reflow](https://github.com/grailbio/reflow) to manage EC2 clusters for running sourmash/khmer on 50k samples. Working on [this workflow](https://github.com/czbiohub/reflow-workflows…