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Main ideas:
- Can start with ADVI/optimization
- Can (sometimes) use reduced data/model (but then reduced validity, still better than nothing)
- I.e. just one random effect, just three states in …
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options(scipen = 100)
options(bitmapType="Xlib")
infercnv_obj = CreateInfercnvObject(raw_counts_matrix=expFile,
annotations_file=groupFiles,
…
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Regards,
I am using pycausal in:
- Anaconda's distribution of Python 3.7.
- Windows 8.1
Everything is working superbly. However, I am having issues with the **_Prior Knowledge_** module.…
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I've installed beagle on Centos 7 and I'm getting an error when I run "make check."
See examples/genomictest/test-suite.log
Please report to beagle-dev@googlegroups.com
Here's the t…
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* UltraNest version: 3.3.3, 3.4.4
* Python version: 3.6.12, 3.9.5
* Operating System: RHEL 7.9, CentOS 7.6
Thanks for creating UltraNest, I really like the improvements relative to MultiNest. I …
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Currently query methods can only return a Factor/TabularCPD instance over a variable. It should also work in the case of queries like:
```python
model.query([('var', 0)], evidence=[(something)]
`…
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Don’t get what goes wrong here:
```
* using log directory ‘/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-BayesVarSel/R-BayesVarSel/work/BayesVarSel/BayesVarSel.Rcheck’
* using R versio…
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Having recently begun the transition from Matlab to Python, Nemos has been a massive help in transferring my Matlab pipelines. Great toolbox!!
I've noticed that Nemos, like other basic modeling pa…
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In addition to storing the average travel time by road segment and by time period, it would be very useful if we could find a way to also include the number of observations associated with the average…