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Hi ,I am using neuroHarmonize to harmonise NIFTI images (T1w) however my harmonised images look blurry. Is this expected?
Before harmonisation:
![before_harmonisation](https://github.com/user-att…
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Per a discussion today, it's silly to have two (extremely similarly named) functions that return ROI masks in volume space. Clearly get_roi_mask has fewer features and is pretty lame because it relies…
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Working on updating axioms from Terry's spreadsheet comparing MP-UBERON-EMAPA
[MP-Uberon-EMAPA mappings.xlsx](https://github.com/obophenotype/mammalian-phenotype-ontology/files/1528051/MP-Uberon-EMAP…
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Hello, thank you for your works.
I want to use ph to extract topological features and perform a post-processing on the surface segmentation of the cerebral cortex. But I am currently a little confuse…
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I am trying to register patches of size 12000x12000 that are sampled from a bigger image. I am observing inconsistent performance of AntsPy.
Let's say i have 20 patches of the above mentioned size…
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# This is an umbrella ticket for the alignment of EFO measurement/trait terms with OBA terms
The focus of this ticket is the table [oba-efo-unreviewed.dosdp.tsv](https://github.com/obophenotype/bio-a…
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Hi Dev Team,
Would it be possible to incorporate the [Gradient Non-Linearity Correction](https://github.com/Washington-University/gradunwarp) (a.k.a., Gradient Distortion Correction, or GDC) into f…
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* **What is the current behavior?**
Now, I expected the results of the interaction effect of gender and group on cortical thickness, but I have no idea how how to set the contrast.
* **Please prov…
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See this [Neurostars post](https://neurostars.org/t/smoothing-surface-data/20159) and #2747 for a related issue.
The idea would be to have a smoothing function for surface data similar to `nilearn.…
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## Summary
Module qc_report_wf has no input. I checked the fmriprep and confirmed I have minimal input to run the Cifti post process. But it always reported that qc_report_wf did not have some input …