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Hi @Vannghia69. I just now had a chance to test your new implementation of the dendrogram optimization on a more realistic and larger dataset: depending on the size and the "alignability" (i.e. how ea…
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I keep getting the error "TypeError: 'int' object is not subscriptable" when trying to plot a dendrogram tree. I have done this successfully before, and only today am having this issue. So, I attempte…
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It seems that "dendogram + heatmap" are already possible to use in plotlyjs:
https://plot.ly/~talgalili/23
Related PR: https://github.com/plotly/plotly.js/pull/1063
Unanswered question on "commun…
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I got the following error after attempting to use `dendrogram.to_hdf5`:
```
File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/Astronomical_Dendrograms-0.5.0-py2.6.…
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I want to plot the expression of a group of genes (rows) in different conditions (columns), but I want to cluster them based on their sequence similarity, not on their expression values. When I apply …
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When using Rstudio, zooming the aheatmap using "Zoom" button on the "Plots" tab leads to zooming the plot but not the dendrogram. Snapshot attached. Resizing the window cripples the dendrogram even mo…
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Originally Pivotal Tracker issue: https://www.pivotaltracker.com/story/show/173160712
bug entered by James M. Melott on 06/03/2020
See images below for same map in different views.
Largest width …
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Map on screen when I saved it
![image](https://user-images.githubusercontent.com/7407788/153041045-18b4234d-8fec-43a0-a21c-49d5725ffea5.png)
Loaded in another tab in same browser
![image](https:/…
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There is a new R package called generalCorr with a simple function
for example,
gmcmtx0(mtcars)
produces 11 by 11 matrix of generalized correlation coefficients. Note that if r_(Xi | Xj) exceeds
r_…
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3.2.1: Show level dendrogram containing 5 instances of each digit (one person)
3.2.2: Use K-Mean clustering to compress each digit into 5 clusters, as done in 3.1.1, and perform hierarchical cluste…