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[](https://oss.issuehunt.io/r/akosbalasko/yarle/issues/487)
Each Evernote has a GUID (e.g. 9b3692d0-af0b-4bc9-a57f-02f49b3692d0) which is also used to construct the internal Note Link (e.g. everno…
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A `VideoFrame` should bring with it the necessary data to handle it. You can already query its width (advancement- and validity-wise) as well as height. You should also be able to query the informatio…
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Project dir: /data/RBL_NCI/Wolin/1-5-22_PUF60iCLIP/PUF60_iCLIP_pipeline/PUF60/01_qc_post
Review error log
```
[sevillas2@cn4305 20230110_1412]$ cat error_log.txt
20230115_2105
The following er…
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Current pipeline (v2.2) did not have any defaults for the modules loaded within the pipeline. As a result when snakemake updated to v 7.19.1, our pipeline used this new version.
Parsing of the conf…
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currently, snakemake is loading the default version from module load. Need to control this as snakemake feature changes will directly impact the pipeline
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Depends on the FPS, but if the weapon delay lines up poorly with the next frame then there is an time creep on the shot. This creep can be as much as 30 milliseconds which will make the MP5 (for examp…
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Removal of PCR duplicates is an essential step in iCLIP analysis. We use the `dedup` function of this package but the other functions could also be useful for including in multiQC.
Happy to fork an…
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So if I communicate with the LogDNA API through postman, posting a log line returns this:
```
{
"status": "ok",
"batchID": "611c8c7b-161c-43b8-88c3-3d90500070af:65281:ld86"
}
```
But if…
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when running DAG sub-command on iCLIP v2.0, getting two errors
1. related to graphviz not be loaded
2. related to print message within pipeline
Command run:
```
snakemake -s "../config/Snakefil…
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Assessment:
For each read, an alignment was assessed for any gaps, with two possible scenarios:
alignment—gap—alignment
alignment—gap–insertion/deletion—alignment
For all reads that match ou…