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Currently R2DT uses covariance models based on Rfam, RiboVision or other sources to predict the secondary structure. The covariance models represent the "consensus" structure that is common to all Rfa…
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https://mp.weixin.qq.com/s/NbPMpPHNfp3lCy0owKW6gg
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Hi,
I'm sorry to bother you again, I tried really hard to figure it out myself (and can keep looking), but maybe you can help give me pointers. I'm running `scsnv collapse` and it's segfaulting, I …
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**Submitting author:** @wrightaprilm (April Wright)
**Repository:** https://github.com/wrightaprilm/treesiftr
**Version:** v1.0.0
**Editor:** @juanklopper
**Reviewer:** @ethanwhite, @rachelss
**Archiv…
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## Describe the issue
Hello VEP devs,
I am trying out the --mirna option to VEP, which according to the doc "Reports where the variant lies in the miRNA secondary structure". This sounds interesting…
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https://mp.weixin.qq.com/s/9DjEipFIFKZspx7zlwTM3w
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https://mp.weixin.qq.com/s/i0Due-eMqa8mrSn5izuQXw
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For the [datasets in the DDE](https://data-staging.niaid.nih.gov/portal/wip/?from=1&filters=includedInDataCatalog.name%3A%28%22Data+Discovery+Engine%22%29&q=), I get different answers than what's in t…
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https://mp.weixin.qq.com/s/9DjEipFIFKZspx7zlwTM3w
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https://mp.weixin.qq.com/s/9DjEipFIFKZspx7zlwTM3w