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I got "After merging with reference panel LD, 0 SNPs remain." for my MTAG analysis.
I found [a previous issue](https://github.com/omeed-maghzian/mtag/issues/8) discussing similar warning.
But my …
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Hi,
I got some error messages when the mtag analysis were all most finished. How can I fix it? Could you help me ? Thank you.
"
2020/11/10/03:17:41 PM ... Completed MTAG calculations.
2020/11/1…
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```
Building a wrapper for the MATE pipeline for processing several documents and
without loading each model for every document, one needs to call the out()
methods of the respective tools (after in…
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```
Building a wrapper for the MATE pipeline for processing several documents and
without loading each model for every document, one needs to call the out()
methods of the respective tools (after in…
-
```
Building a wrapper for the MATE pipeline for processing several documents and
without loading each model for every document, one needs to call the out()
methods of the respective tools (after in…
-
```
Building a wrapper for the MATE pipeline for processing several documents and
without loading each model for every document, one needs to call the out()
methods of the respective tools (after in…
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Hi,
I wanted to run mtag for 87 traits. It was able to compute Sigma and Omega successfully but it terminated at the MTAG calculations.
**2023/03/08/11:33:50 PM Completed estimation of Omega ...
…
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Hello,
I'm trying to run MTAG with beta and SE, using the instructions from here:
**Note: If both the effect sizes and the standard errors are present in the input GWAS summary statistics, z is…
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Hi,
I have git cloned the MTAG directory and created the conda environment. mtag.py works just fine but both ldsc.py and munge_sumstats.py do not work at all.
python ldsc.py -h throughs at me this …
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I'm testing whether MTAG can help with polygenic risk score prediction for a pair of traits with poor genetic correlation. My primary phenotype is bipolar disorder (BIP), and I performed MTAG on BIP v…