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As an **open science researcher**, I want to **provide Docker/Singularity container images** so that **others can reliably reproduce my results or reuse the same software**.
This implies th…
stain updated
5 years ago
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### What happened?
The build info of a nextflow module currently reads:
```yaml
build_info:
config: "src/arriba/config.vsh.yaml"
runner: "nextflow"
engine: "docker|native"
output: "ta…
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Github actions: https://github.com/nf-core/gh-actions-lint
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Hii Robert
I have a new MacBook Pro with following specifications
Chip Apple M3 Max
Memory 36GB
macOS Sonoma 14.1
I was trying to test the Bactopia using docker…
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I'm getting the same error for 2 weeks and yes, I am using the right username/password now.
https://github.com/docker/hub-feedback/issues/786 says the issue should resolve itself in a couple of hour…
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## Version of Singularity:
2.3-dist
### Expected behavior
It should pull a container image from the Singularity Hub and store in the specified path.
### Actual behavior
When pulling a…
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For example: https://github.com/Sydney-Informatics-Hub/Parabricks-Genomics-nf/blob/main/modules/annotate_vcf.nf
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Provide readme too. Like [here](https://github.com/Sydney-Informatics-Hub/Parabricks-Genomics-nf/tree/main/bin)
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Add github issues template, like [here](https://github.com/Sydney-Informatics-Hub/Parabricks-Genomics-nf/tree/main/.github/ISSUE_TEMPLATE)
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As the WES specification gains traction and there are more adopters, it is becoming apparent that interoperability between WES implementations is a real challenge. Initiatives like FASP have highlig…