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On idr0125-pilot, going to test import of METADATA.ome.xml and then use mkngff to replace the fileset with full NGFF plate mounted on s3.
```
sudo cp idr0125/SQ00015207__2016-04-24T05_39_26-Meas…
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### Short title
Publishing FAIR Datasets from Bioimaging Repositories
### Project Description
The [Image Data Resource (IDR)](https://idr.openmicroscopy.org/) is home to 13 million multi-dime…
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```
[test@1f99c18b86c3 ~]$ pwd
/home/test
[test@1f99c18b86c3 ~]$ ls
[test@1f99c18b86c3 ~]$ ln -s /opt/omero/server/venv3/bin/omero
[test@1f99c18b86c3 ~]$ ./omero login
WARNING:omero.util.T…
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Info:
* Web Bug 5.8.1
* Python 3.6
* Mozilla/5.0 (Windows NT 10.0; Win64; x64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/100.0.4896.127 Safari/537.36
User feedback:
> I have logged …
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At least for the "ansible-example-omero-onenode" playbook and under Ubuntu 20.04, the omero-server and omero-web users are created but without a usable bash environment. Would be nice to have those ac…
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There are a handful of queries that attempt to load a large amount of data on a large server such as IDR.
These can be slow and need to be cached.
One option is to use the https://github.com/ome…
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idr0001 has 192 x 96-Well Plates, 6 acquisitions each.
1 Plate converted [below](https://github.com/IDR/idr-metadata/issues/683#issuecomment-1886903270) is 47 GB.
Approx 4.5 TB in total.
bioformats…
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Some simple integration tests would be quite useful for this repository.
see also the unrun integration tests, e.g. https://py3-ci.openmicroscopy.org/jenkins/job/OMERO-test-integration/127/consoleF…
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See https://forum.image.sc/t/omere-figure-export-pdf-does-not-work/39573/30
On release, we should update the omero-server Docker with the Pdf export script, as well as the omero-web Docker.
That w…
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Observing an issue of slow service when images are being rendered.
1.
docker-compose run locally on M1 (first description of the general narrative):
- ``touch "foo&sleepOpenBytes=10000.fake"`…