-
### Situation Description
As a data protection officer might want to change the purpose or the legal cases in a faster way than working from field to field, we should allow bulk actions on the data…
-
-
To do this, the assignee would need to update the main [README.md](https://github.com/mrc-ide/priority-pathogens/blob/main/README.md). The README has not been updated since the living reviews were mov…
-
There is a lot of interest currently in how infection outbreaks occur in localized environment, and the different transmission modes that result in infection. It would be great to see an example use o…
-
- Initial split randomly by date-district combinations. While we are not doing any spatial extraction, we need to have spatial splits because the outbreak data is so clustered in time that we wouldn't…
-
### Steps to reproduce the problem
1. run mastodon sidekiq services for one or more weeks without restarting the process
### Expected behaviour
jobs do not continue executing for hours or days lon…
-
In order to test out how well our database schema works for certain tasks, I thought we would could run a few trial queries. The idea here is to see how easy it is to get info out of our schema, and …
-
This term is motivated by epidemiological investigation of outbreaks. (A pathogen can be transmitted at a social gathering directly or through food served at the event.) It currently sits in GenEpiO …
-
Using the reprex below, the
- `check_date_sequence()` output gives the incorrect row id's
- `print_report()` output gives the date columns but without the row id's
However, within an analysis wo…
-
The infection control team at St Thomas is currently using genome-sequencing to identify where disease outbreaks are occurring in the ICU. This involves finding clusters of people who all share the sa…