-
```
The KDTree-based distance search does not take periodic boundary conditions
into account. Christopher Ing suggested [1] to use Patrick Varilly's "periodic
KD-tree" code" available at https://git…
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Applying the `simplexify` function to a `CartesianDiscreteModel` with periodic boundary conditions results in an error.
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I am trying to solve the 2D Stokes equation with doubly periodic boundary conditions.
For the 0th mode, we need to fix the coefficient **\hat{u}_{00} = \hat{v}_{00} = \hat{p}_{00} = 0**. I impleme…
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We likely need to take special care of the B fields around non-periodic boundaries, so that we do not introduce div B from there.
This likely also pertains to prolongation/restriction operations fo…
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For the three-dimensional case, when adding an external electric field, I want to add it on the line in the x-direction where yz=0 (i.e., the boundary). According to the documentation, I used upper an…
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Dear Lu Lu,
Thank you for such a great package. I really consider deepXDE as a future working tool for my research interests.
Here is my specific problem:
![image](https://user-images.githubuserc…
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For a "1d" system described by a 2d (or 3d) simulation with Bloch-periodic boundary conditions in the x (or xy) directions, the Green's function is simply a planewave. It would be nice to support thi…
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For the inverse Cole-Hopf transformation, it looks like you are just using `np.exp()`—that doesn't seem right. The initial conditions don't have periodic boundary conditions after transformation, and …
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Dear developers, we are considering to use MDAnalysis as a tool to perform analysis on MD trajectories produced mainly with DFT codes (e.g. VASP, abinit), which use periodic boundary conditions. After…
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Hi,
I was wondering how complex it would be to include PBCs in the calculation and display of atoms within the cutoff radius for an atom. At least from my perspective, it would be super helpful. Id…