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When I want to compute glcm features, it always gets this.
The input is the path of the jpeg, and I want to compute the glcm of the 2D image. I have already read question #242 and do the following jo…
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Hi,
For context, I have been able to successfully run PyRadiomics from the command-line, both for single image-mask pairs, as well as running batch extraction for tens of image-mask pairs simultane…
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Is it possible to use extract first order features on 2D tiff images using the built in class?
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Hello I have a inquiry regarding urgent debugging problem of data format debugging.
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Hi,
First time user to image analysis and processing. I've used both dcm2niix as well as 3DSlicer to export dicom images to imaging formats that pyradiomics can use. However, it's not clear to me f…
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Before extracting the radiomics features, I want to use a CNN segmentation model to segment the MRI. But after that, both the mask and image have changed into a series of numpy. Can I directly ext…
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Hi, I have to analyze 45 sets of 3D images. Whenever I run the program I get an error
list assignment index out of range. When I am running only 15 cases it runs fine. Will appreciate any help.
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I'm new to pyradiomics and just installed it under MacOS/conda:
$ conda install -y pip
$ pip install pyradiomics
$ python -c 'import radiomics; print(radiomics.__version__)'
2.1.…
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Hi,
I am trying to calculate a parametric image by extracting voxel-wise features from a square kernel. After reading the reply in this thread: https://groups.google.com/forum/#!topic/pyradiomics/k6W…
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Hi,
I am having an issue reading multiple files by looping over different cases in pyradiomics. I am using following code
`for Case_id in range(1,6):
path = '/Users/abhinandanbatra/Desktop/pyr…