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I would like to run your docker container using singularity, however the conda environment needs root access which is not permitted with singularity. Could you alter the path to another location? Alt…
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While trying to run an `e4s-cl init` I received an error that said it was an e4s-cl bug, and to report the contents of a debug file on github. Below is the pasted contents of the file:
```
$ cat /h…
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Afternoon,
Thank you for creating a docker image of this program. I have successfully used your singularity image in the past. Unfortunately, I noticed there does not seem to be a direct way of add…
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I'm wondering if running our website as a docker or singularity container is an option. Because our installattion instructions are a bit complicated, and they could be fully automated using docker.
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**Is your feature request related to a problem? Please describe.**
The installation and usage of singularity can be kind of esoteric in comparison to the usage of docker for running OCI images. The a…
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## Description
[Singularity](http://singularity.lbl.gov/) is a container-based infrastructure tool specifically geared towards HPC clusters. From my understanding, it roughly combines the portability…
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Hi, firstly thank you for creating the nabseq_nf pipeline.
I've been running the nabseq pipeline on Seqera/Tower and noticed that the biggest bottleneck is the `subset_aligned_reads ` step, which f…
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**Galaxy Version and/or server at which you observed the bug**
Galaxy Version: 24.1
### Expected behaviour
Singularity mounts no home directory as that can affect reproducibility (settings from h…
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Hi @arnaudbore,
Moving this here as requested. I get the following when using `scilus-flows_1.5.0.sif` built from DockerHub:
```
singularity run /groups/adamraikes/singularity_images/scilus-flo…
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Getting the following error from rnaseq_pipeline_workflow.createSE:
`WARNING: 'nodev' mount option set on /restricted/projectnb, it could be a source of failure during build process
INFO: Startin…