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@bcli4d
In the absence of some direct method for identifying derived images, I am working on the following workaround to tabulate 3rd party data in each data collection:
1. Create a (BQ) table, 'th…
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https://help.cancerimagingarchive.net/servicedesk/customer/portal/1/TH-46321
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```
$ python deep3Dpredict.py -name OASIS_ISBR_LPBA40__trained_CNN.save -data TCGA-02-0046_1998.11.28_t2.nii.gz -output deep-mask.nii -gridsize 16
```
```
WARNING (theano.tensor.blas): Using NumP…
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Hello, I have an issue with a dataset object returning the error:
`AttributeError: Unable to convert the pixel data: one of Pixel Data, Float Pixel Data or Double Float Pixel Data must be present in …
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Using Python3 on a jupyter notebook, I am building an application which gets images from TCIA.
The query being sent is:
`https://services.cancerimagingarchive.net/services/v4/TCIA/query/getSingleI…
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65000 limit is too stringent for radiology use cases. A single imaging study can easily have more than 1000 DICOM instances. This was also brought up by Ulli.
Some ideas are below - what is feasibl…
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For IDC
- [x] Review and investigate SNOMED DICOM subset that is in public domain
- [x] Assess options for programmatic query of relationships by way of mapping to public standards
- [x] Obtain a…
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There are 118 series in RIDER Lung CT, for which the TCIA /query/getImage API returns an empty zip file. This has been reported to TCIA.
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@fedorov June 25, 2020
TCIA API does not allow to separate 3rd party from the rest, and so when TCIA collections are downloaded via TCIA API, 3rd party are always included, but most likely the down…
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Several of the data collections do not have doi.org DOIs. These are CPTAC-HNSCC, Anti-PD-1_MELANOMA, APOLLO-1-VA, National Lung Screening Trial, RIDER Phantom PET-CT, RIDER Breast MRI.
That is, t…