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Initial proof-of-concept functions and scripts showing the following steps:
- [x] Access of atlas metadata (including spaces & parcellations) via RESTful API
- [x] Query of atlas metadata to identi…
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Hello,
Thank you creating this software and for making it relatively easy to implement for a novice (took me a few tries to realized my GPU memory of 2GB was not sufficient to run fastsurfer with …
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The following issues need to be fixed:
- `cbpp/bin/procedure_descriptions/README.md`
Under `cross-validation procedure with hyperparameter tuning`, `Input data` box: dimension of FC for parc…
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**Submitting author:** @mathieuboudreau (Mathieu Boudreau)
**Repository:** https://github.com/qMRLab/t1-book-neurolibre
**Branch with paper.md** (empty if default branch): main
**Version:** v1.0.0
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**Describe the bug**
Slicer shows the automatic label with a different origin. Apparently, it is related to the way ITK interprets the nifty header. From this discussion, it seems nibabel and nifty d…
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At the moment we can access one single atlas/parcellation/space/region by id.
Since siibra-python has the feature of a fuzzy search, we could implement the same feature for siibra-api.
For examp…
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Would it be possible to put in default the parcellation template having the highest number of datasets coupled to the atlas?
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Dear expert
For my project, I need to use ACT algorithm for tractography But when I select it in the CMP3 GUI and run my program using connectomemmaper3_docker the following error occurs.
The run…
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When returning a list of regions, more template dependent data should be included. For example 'centroid'.
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Hello Raamana,
Currently trying to use the visualQC output for surfaces visualizations. They work for aparc+aseg/
I have freesurfer installed and sourced to terminal, however, this message keeps …