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Julien and I have discussed that the default free energy analysis method should from now on be MBAR and not TI any more. I have rewritten the code to now generate output files that can be used for MBA…
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After creating a model multiplexer for regr.glmnet, any attempt to call predict with that learner will generate an error. For example...
```
library(mlr)
base.learners = list(
makeLearner("re…
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```
Ellipsoid approximation calculator uses the transition matrices X(t,t0) to
calculate the good directions l(t) for ellipsoidal approximation. The problem
is that for certain systems (matrices A(t…
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I just tried to fit the nonlinear historical Cox model for the first time, i.e., $\log h_i(t) = \log h_0(t) + \int \beta(s, t, X_i(s))ds$. Note that in mgcv syntax, this term is converted to: `s(smat,…
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I'm trying to do some analysis with at train/test setup, but I'm having trouble seeing how to do it with Cyclops. I've been using the predict function (https://github.com/OHDSI/Cyclops/blob/master/R/M…
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As you see from the recent updates, I'm finally getting a chance to get back into `pcox`. I'm working on changing functionality to accommodate methods now (in particular `predict.pcox()`, but it will …
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For this historical Cox model, I need to create a smooth using something like `s(smat, tmat, by=LXmat)`. Coordinates for which `s>t` shouldn't ever be used. Up until now, I have been getting rid of th…
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Is there a way to dump the model formula ?
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Hi,
we use crs in mlr here:
https://github.com/berndbischl/mlr
We now load the package internally via requireNamespace.
But I have noticed that you initialize a necessary option in .onAttach in z…
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I am trying to run a elasticNet model, but when run train() function, I got following error:
Warning message:
In nominalTrainWorkflow(x = x, y = y, wts = weights, info = trainInfo, :
There were mi…