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Y叔你好,
在使用compareCluster函数对多个数据集做比较分析后,使用dotplot绘制结果,发现排序让我挺困惑的,所以想请教一下。我查看函数说明默认是以`geneRatio`排序的,但看着结果图又感觉不是哎。
(分析的时候是照着您Bioconductor的包主页做的,我也记不清具体您有没有在文档中说明了,最近网络很不好,一直进不去,所以只好在这里留言请教你了。)
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https://mp.weixin.qq.com/s/GK5HWonCcM8BpjMA6MJsbQ
ixxmu updated
8 months ago
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https://mp.weixin.qq.com/s/NY2PHQUG54nLeTvkxe4nxw
ixxmu updated
9 months ago
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https://mp.weixin.qq.com/s/Fx66i8MefYZ_FgzKK8MArw
ixxmu updated
6 months ago
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**Describe the bug**
On the small example adata, several cell types have
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Add titles to plots:
Bars: currently: labels = rev(Bin_Bars[,1]). Swap with character vector entry or change style to de2017importance fig4 style: lines with dot ends (lend=0)?
dotplots: more diff…
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https://mp.weixin.qq.com/s/gUYm7bVbmI1SjeSUWwbCTQ
ixxmu updated
9 months ago
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Hey thanks for this tool. I'm getting the following error during the `run_genespace` step.
```
############################
1. Running orthofinder (or parsing existing results)
Checking …
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https://mp.weixin.qq.com/s/Jw6tK4ByfdDbnQXBZSC75A
ixxmu updated
9 months ago
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Dear Samuel,
Thank you so much for this amazing package! it is an amazing way to visualize and analyse scdata!
I am currently running this on my 10x scSEQ dataset, which was preprocessed with the st…