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I get an 403 in R studio when I try and push to the repo. Hopefully just a permissions issue?
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I am running the following command:
python SNPbam2vcf.py ancAnatBam.list BonBarTep.vcf 1000G_D100KApart.list
ancAnatBam.list contains the paths of a list of Bam files.
1000G_D100KApart.list is th…
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I put together a starter Rmd for chapter 2 and pushed it to the repo. Like last time, each team should make a copy for themselves and push back to the repo.
This chapter is more matrix heavy, so…
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I need a course number for the IRB
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There are a few other projects that are working towards the same goal. We need to make sure that we're in touch with them and learning from them and/or working with them rather than duplicating any ef…
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**Improving multi-locus sequence typing software**
The study of the genomes of Borrelia burgdorferi, the organism that causes Lyme disease and is spread to animal hosts by ticks such as Ixodes scap…
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_From @Dreepa on March 31, 2018 23:10_
Currently you have no clue as to get an idea where the market prices are on average, except for checking each store individually, if I am not mistaken.
Probl…
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Hi everyone,
I had some suggestions to try to make figure 1 (the map figure) a bit clearer with titles and the numbers shown on the plot. I've tried to incorporate some of that, but before I start …
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does it using any mat calculation accelerate framework from rust's lib?
any plan to make it further, for instance, make it like ggml popular
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Now that we've submitted, we should clean the messy repo up a bit and get rid of all the extraneous files that built up over the weeks.
Delete:
- `Neotoma_paper_AD.Rmd` -> No longer needed
- `Rplots.…