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running `runLinkPrediction_ppi.py` on edges generated from the first 10k lines of the String DB, I'm getting a key error here:
https://github.com/monarch-initiative/N2V/blob/e159e15bedc89dacc5e8e30…
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Is there a way to adding seeding functionality in order to produce same result for debugging/testing purposes?
We try to seed before every rand function call but it produces different results in ev…
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**Submitting author:** @palash1992 (Palash Goyal)
**Repository:** https://github.com/palash1992/GEM
**Version:** v1.0.0
**Editor:** @danielskatz
**Reviewer:** @jsgalan, @rougier
**Archive:** 10.5281/z…
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### Description
Currently the documentation does not give much information about how to create graphs for use with StellarGraph. Homogeneneous graphs are straighforward and have many demos showing…
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### Description
Currently, someone looking at our demos lands at https://github.com/stellargraph/stellargraph/tree/develop/demos (or https://github.com/stellargraph/stellargraph/tree/master/demos) …
huonw updated
4 years ago
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Should we add a file with various utility functions for working with the embeddings?
For instance, something like this to get the most similar words?
```
def get_cosine_sim(emb, valid_words, top_k)…
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### Describe the bug
We have some error messages that print a type. This is best done with `type(x).__name__` because printing `type(x)` directly shows the `repr` of a `type` object, which is weird…
huonw updated
4 years ago
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Hi all,
when calling randomWalk procedure with a direction which is not BOTH (either using random or node2vec modes) I get the following null pointer exception:
2020-01-23 10:56:28.224+0000 IN…
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any example on node2vec including running scripts, graph data and so on.
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I want to put the float number weighted graph as edgelist for the input, but apparently
it doesn't work. Can you guide me?