-
I found a curious situation when trying to annotator a large insertion in FLT3. This insertion of about ~100 basepairs seems to produce a hgvs_p signifying a delins affecting nearly 400 amino acid cod…
-
```
What steps will reproduce the problem?
1. I run blastp separately for every strains as following:
ncbi-blast-2.2.29+/bin/blastp -evalue 1e-05 -outfmt 6 -query 0001.fasta -db
genesOfAllStrainsDB…
-
Hi,
I find it useful if one can choose different colors for the features in the plasmid map.
Currently , if you label a Sequence as a promotor this part is then green.
Maybe best is if you can cho…
-
hi,
when I run the command `./CAT_pack/CAT contigs -c "/home/jiaojiao/cat/test.fasta" -d /home/jiaojiao/cat/CAT_prepare_20210107/2021-01-07_CAT_database/ -t /home/jiaojiao/cat/CAT_prepare_20210107/20…
-
Meeting follows on from July 2021 meeting at #47.
**When**: Tue Aug 3rd 2pm London (BST).
**Where**: https://ucl.zoom.us/j/98754959307
**Recording**:
**Actions from Last Time**
- [x] July me…
-
@lindseyfaye @rsmoak I have created a new subfolder to contain all analyses for the two protein families you have worked on. I suggest you start organizing the data and analyses in this folder -- prot…
-
Background
------------
I am currently using the pre-assembly processing step of the [ATLAS pipeline](https://github.com/metagenome-atlas/atlas) to generate enhanced input sequencing reads for FGS++…
-
Hi !
I have a couple of questions related to the HUgging Face models.
Base on the task avaialbe in the deepchem wrapper. Is not possible to perform task like text-generation of this kind of exam…
-
## Expected Behavior
I want to create msas for a batch of heterodimers using colabfold_search and predict the structure for the msas using colabfold_batch without using the mmseqs server for msa gene…
Nuta0 updated
4 months ago
-
## Expected Behavior
More docs about the pairaln module, which seems to be an important module for the MSA pairing of AlphaFold Multimer.
## Current Behavior
I cannot find any descriptions about …