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Hi,
I ran cellsnp-lite, and failed with "[E::idx_find_and_load] Could not retrieve index file for './gex_possorted_bam.bam'", so what should i do next?
Thank you very much!
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Hi. I'm trying to run polysolver on bam files already aligned by someone else.
I'm getting the following error:
[bam_parse_region] fail to determine the sequence name.
[main_samview] region "6:29…
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Mô tả: Nút bấm có 2 vấn đề
- Font chữ mặc định là tốt, nhưng trường hợp này nên cho to một tí vì cán bộ y tế mắt kém
- Nút **Kí lại** chưa rõ ý lắm. Cứ ghi là **Xóa bảng và kí lại**
- Nút **Lưu …
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```
This functionality should exist. Just haven't had time to add it yet.
```
Original issue reported on code.google.com by `aaronqui...@gmail.com` on 17 Jul 2010 at 12:31
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I've been using the biodalliance embedded genome browser, but it doesn't support CRAM formatted files, so I was thinking creating a minion web service to wrap a samtools conversion command. Has anyone…
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See https://github.com/samtools/htslib/issues/593#issue-259627325 for context.
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Hi I'm trying to create the BAM file and it gives an error.
I have installed recycler using bioconda.
This is the error:
Danielas-Mac:Recycler niazevedo$ make_fasta_from_fastg.py -g assembly_gr…
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I have a user who is attempting to convert a cram file into a bam file, but getting the error below. Do you have any suggestions?
Environment:
RHEL 7.1
openjdk 1.8.0_101
cramtools-3.0
Comm…
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I' am trying test GFusion on a small dataset. The reference genome sequences I've downloaded is hg19 from [http://ccb.jhu.edu/software/tophat/igenomes.shtml](http://ccb.jhu.edu/software/tophat/igenome…
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> RiboseQC_analysis(annotation_file='Mus_musculus.GRCm38.93.gtf_Rannot',
+ bam_files= "test/M12RPF-JC_A1-RPI37.rmRep.rmDup.sorted.bam",
+ write_tmp_files=F,readle…