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Hi,
I'm just testing the new GUI - thanks for that, that's awesome! I have a couple of issues though.
I wonder however that there is no options choice for AptaPLEX, e.g. AptaplexParser.PairedEndMinO…
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Hi there,
First of all - great work! I hope I will be using it soon!
I've got a problem though, which surely is caused by my lack of computer/bioIT skills (and these are indeed pretty low, so please…
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Hi,
first, I think the example command line in the manual is wrong..
https://github.com/drivenbyentropy/aptasuite/wiki/Basic-Usage
it shows:
```
java -jar /path/to/aptacluster.jar
```
but …
ghost updated
6 years ago
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Hi,
When using option _-parse -export cycles_ my exported .fasta data looks like that:
`>AptaSuite_1|test|length=43
718465846567678471676571678471657171677167677165717165656767677167718465677184718…
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Hi,
I was pretty surprised to find out that the clustering algorithm differentiates between sequences with the same random region and different primer regions (misreads). Example:
> >Aptamer_12004…
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My apologies if this has been reported before. I am currently trying to port my own project to Java 9+ and I am using your excellent plugin as a maven dependency. Using JDK 1.8x, everything works smoo…