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Dears all,
After a clean install of biomaj and biomajwtacher on a CentOS server, I starting to configure some proteic banks. Today, I manage a pool of 19 banks with 17 of them working well. For two b…
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Hi,
I've discovered a little bug when I try to start a postprocess for a bank which failed its last update.
Let's say I have `BLOCKS=A,B,C`. `BLOCKS A` succeeded but `BLOCK B` failed. Then the bank u…
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Hi,
I've noticed it not possible to re-launch postprocess(es) from a bank if this bank has been updated but the previous release number was the same.
e.g.:
```
$ biomaj-cli.py --update --bank foobar…
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biomaj 1 used "_" separator between bank name and release
biomaj 3 uses "-"
For compatibility, allow to specify in config which separator to use, using "_" as default
Add optional config param: rele…
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Hi
For ftp protocol at leste there is a problem when getting the date of a file. A file with date 10/06/2015 for exemple leads to a release of 2015-6-10. I think it should be 2015-06-10.
Thanks
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Hi,
I've discovered a small bug in the method `get_production`, which actually fails when we pass a release as number or int. Here is an example :
Consider this bank in MongoDB:
```
{ …
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Hi,
I've discovered a small bug running `biomaj-cli.py` and using options `--stop-after, --from-task` and `--process`. If you run a bank update following the workflow below:
**Update the bank and sto…
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Hi,
I've found a small problem while updating BioMAJ bank and having to delete old sessions because of parameter `keep.old.version`.
Here is my situation. I've updated my bank several time using `--f…
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Hello,
I get an error when I try to `remove-all` a bank :
```
[root@vm0121 biomaj]# biomaj-cli.py --config $BIOMAJ_CONF --bank taxonomy --remove-all
Log file: none
'Elasticsearch' object has no attr…
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If a remote bank reverts to a release already in production (revert due to issue in latest release), biomaj will not increment the release.
Prod: release13, release 14 (latest)
Revert to 13 and updat…