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Is there a way to apply a p-value adjustment on all p-values in the extra column? For by incorporating the `p.adjust` function somewhere? I am assuming that the `pvalue` function from the vignette is…
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That unit test should be able to test L1, chi-squared, and the whole objective function.
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Hi Felix,
I have two questions.
1) I managed to get my COV files uploaded onto Seqmonk and got to visualizing the probes using 'Bisulphite Methylation Over' pipeline but I haven't been able to …
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Even though the code seems correct, I am not sure, how you are getting the following numbers
The total no of visitors is captured as 5,403.
The correct total no of visitors is 5004.
This caused…
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Need to see if there is any statistical difference between clusters. Use Chi Squared test
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- For BINARY (e.g. mutational signatures), we can do Fisher’s exact test and render the data similar to Mutations.
 ,I wi…
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Great job on performing all the chi-squared tests! In particular, great that you interpreted the meaning of the p-values and not just showed the results!
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Firstly, nice job on running a chi square test on multiple contingencies, not just the ones that were asked of you. However, we should try to use descriptive variable names as often as possible to inc…
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Hi Dr. Hou, it's great to have an alternative to try in relation to tradeseq - I thought the paper was clear and an interesting read. I was wondering what expected runtimes may be for the lamian_test …