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We may think about adding support for more badges in the future.
There are some lists here:
- ~~https://github.com/chetanraj/awesome-github-badges~~
- https://github.com/Naereen/badges
- https://g…
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Hello,
My name is Michael R. Crusoe. I'm one of the co-founder of the CWL project, the CWL Project Lead, and since a few years I am a member of de.NBI/ELIXIR-DE based out of F. U. Berlin. I'm also …
mr-c updated
2 months ago
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Update sherlock_workflow.xcf
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This is implicitly not possible in `v1.0`: http://www.commonwl.org/v1.0/Workflow.html#WorkflowStepInput
The definition for `valueFrom` ends with "The value of inputs in the parameter reference or e…
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Part of #219
These are recurrent questions about `cwltool` & CWL (the user guide being focused on `cwltool`, I think we can answer that in the guide).
- [x] Can I use singularity? https://matri…
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see https://github.com/common-workflow-language/common-workflow-language/issues/559#issuecomment-348160520
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https://github.com/galaxyproject/galaxy/pull/10408 adds the ability to view this data in the GUI and annotate it in tools and workflows.
The Galaxy hook on the tool side is parse_license and parse…
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This method assumes a `DockerRequirement` with `dockerPull`, and will fail otherwise:
https://github.com/Duke-GCB/calrissian/blob/b4526afa79ab4d0a5e766d068dbd3acf0ba20d4b/calrissian/job.py#L216-L22…
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Example of consuming the CWL input object:
~~https://github.com/common-workflow-language/cwltool/issues/242#issuecomment-283966762~~
https://github.com/common-workflow-language/common-workflow-lan…
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Hi all,
I am experimenting with `cwl.output.json` to get the results back from a CommandLineTool that executes in a Docker environment. This works fine, but there appears to be a problem when re-…