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We have identified some CpG sites associated with disease condition, could you please help how I can Identify SNPs associated with these sites using GoDMC resources? Is these any script/pipeline where…
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I was using the following snippet to run a test,
```c
int main(int argc, char *argv[]) {
int *tmp = NULL;
int x = 2;
if (argc > 0) {
tmp = &argc;
}
return *tmp;
}
```
`x` ha…
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The workflow could look like:
1. Add a CPG application for WY in the appconfig
2. After clicking lat/lng call CogQuery & calculate all available
Post request to `http://cogqueryalb-441643773.us-…
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**Tool Details**
- **Name of tool:** methylQA medip
- **Tool homepage:** http://methylqa.sourceforge.net/
- **Tool description:** a methylation sequencing data quality assessment tool. The medi…
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- Many PHP discovery rules that were working fine on 01/02/2023 are not working anymore.
- Consider for instance pattern instance [1_instance_76_function_variable](https://github.com/testable-eu/sas…
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Hi,
I want to use defiant to identify DMR in my WGBS data (non-model organism). I used the following command but can not identify any DMR. Please let me know if and how I could relax the conditions …
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Dear Adam,
I can run the test data smoothly with the script NXF_VER=20.07.1 nextflow run epidiverse/ewas -profile test,conda
But when I run the pipeline use input parameter with script NXF_VER…
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Hello,
We've been working on running MuSiC2 on some dog cancer samples to find significantly mutated genes. There's a couple of types of warnings we've been seeing that we'd like to get advice on.
…
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Hi Simon,
Thanks again for your help earlier with the non-stranded issue. I am having one (hopefully easy-to-fix) issue with methylation extraction.
Running `extract` on a few human WGBS dataset…
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Is the code below correct ?
```scala
val cpg = importCode.c.fromString(
"""
|int nested(int a) {
| int x;
| int z = 0x37;
| if(a < 10) {
…