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Hello :
We employed DIA-NN 1.8.1 to obtain results for the same data on different platforms (Windows / Ubuntu), and all processes were completed without any errors. Nevertheless, we discovered some…
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Hi Vadim and team,
I have generated a spectral library in skyline which I have exported as a report to be used in DIAnn. The reason for doing this is that I am analyzing histone PTMs and am interes…
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Hi @xobs
I think i still don't get you, so would like to pursue your patience :grin:
From the bring-up code, i understand which register and which value should i set to make it work.
(https://…
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I am attempting to convert mztab peptide identification from casanovo to .blib format but have been unsuccessful using BlibBuild. The first error I recieved was:
```
(base) kostrouchov@myip:~$ ./B…
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# Abstract
Data Independent Acquisition (DIA) creates a “permanent record of everything” that is ideal for reanalysis, arguably the primary goal of public data repositories.
Within ProteomeXchange…
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Hello Isicle developers,
I try to reproduce the example of collision cross section. The Isicle was installed correctly according to the message
```
Requirement already satisfied: certifi>=2017.…
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While testing quantms, we found https://github.com/bigbio/quantms/issues/432 an error in some of the raw files:
```
Progress of 'loading mzML':
Progress of 'loading spectra list':
-- done […
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Curious to know if timsTOF support might be added to xiSEARCH. The inclusion of the ion mobility dimension might benefit some of the crosslink experiments we are currently performing.
As it is now…
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Hello.
I think I am correct in saying that isoerror and isoerror2 in the features output file is the mass difference in ppm between the monoisotopic peak and its 1st or 2nd isotope. Are small valu…
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### Basic information
* My operating system and version:
`uname -a`: `Linux (archlinux) 6.4.7-arch1-3 #1 SMP PREEMPT_DYNAMIC Wed, 02 Aug 2023 09:47:27 +0000 x86_64 GNU/Linux`
`java --version`: `o…