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windows 10
python 3.6.3
networkx 2.2
pyglet 1.3.2
Either of windows command shell or PS reports:
(networkx) PS D:\venv\networkx\graph-editor-master\graph-editor-master> python .\graph_editor.…
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The `nodes` argument to `from_networkx` shadows the `nodes` argument to `bipartite_layout`, so the keyword argument is not forwarded to the layout function.
http://holoviews.org/Reference_Manual/ho…
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### Summary
Implement the geographical-geometric graph that Jobst suggested. This would be the last flavour of graph that we implement, as we look to move away from Graph - network orientated change…
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**Describe the bug**
When the input graph for the method `cdlib.utils.convert_graph_formats()` is a networkx graph where the node type is neither a `string` not an `int` (but is hashable as network…
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Add ability to work with anytree as networkx graph.
I am not expert, bad case is to generate networkx graph. May be better to make some adapter?
Networkx can be made optional behind flag (extra/…
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In networkx >= 2.4, the `Graph.node` function has been deprecated in favour of `Graph.nodes` (see https://networkx.org/documentation/stable/release/release_2.4.html#deprecations).
This means that w…
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### Question
I want to add a graph to the observation space by
```
# Create NetworkX graph
G = nx.Graph()
# Add nodes (C-alpha atoms) with 320-dimensional zero embeddings
for _, ro…
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When using `networkx.readwrite.json_graph.tree_data` to returns data in tree format that is suitable for JSON serialization and then convert this data back using `networkx.readwrite.json_graph.tree_…
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## 🐛 Bug
When running benchmarking script with `--checkpoint_activations True` we get:
> AssertionError: t54580_out for rematerialisation
This issue is present for the following models:
'Ll…
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Hi,
Thank you for making this repository available! I am attempting to use these tools, and wondering what the binary input format for the graphs is, and how to generate it starting with a DIMACS o…