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At this line, a space is inserted between the `status` var (Referred to as `Comment field` in the UI, I think), and the preceding speed, freq, alt vars.
https://github.com/ge0rg/aprsdroid/blob/204…
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### Description
# Hvcf from PHG created Gvcf
phg gvcf2hvcf \
--db-path /path/to/dbs \
--bed /path/to/bed_file.bed \
--reference-file /my/ref.fasta \
--gvcf-dir /my/gvcf/files \
…
em255 updated
6 months ago
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Hello, thank you for the version 2 of the PHG tool. I have six diploid genomes (12 haplotypes) of a fruit tree species. I am trying to align 11 haplotypes to a chosen reference haplotype however I am …
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Change the names of following peptides and CHEMs in the library (symbol, (new symbol), old name -> new name):
- [x] Az, Azide -> 4-azidobutyric acid
- [x] hxy, Hexynyl alcohol -> 5-hexyn-1-ol
- […
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### Is there an existing issue for this?
- [X] I have searched the existing open and closed issues.
### Description
if i shift-select a larger number of auras (see reproduction steps) it skips some…
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Hello, I was able to go through the build and load module of the pipeline. I have the hVCF files in the `output/vcf_files` directory. Next step is to build the kmer index. Here is the command -
```ba…
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I am trying to setup an environment which includes both minimap2 and the latest tiledbvcf-py versions. Conda/mamba is not able to set this up due to incompatibility. Minimap2 and older versions of t…
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DON'T submit
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### Description
Currently secsipid has a method to sign arbitrary (json) data (`secsipid_sign`), however it has no converse method to check the signature. Currently, an attempt to check a `div` si…
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### Description
I completed running the export-vcf command and got a HVCF folder full of gvcfs filled with hashed alternate alleles that look like haplotype IDs. However when I get to the kmer index…
em255 updated
5 months ago