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Noting here there are still some issues with SGD's complexes:
https://release.geneontology.org/2024-09-08/annotations/sgd.gpi.gz has
>SGD:S000218003 CPX-1852 RPD3L histone deacetylase complex|RP…
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IFNL3 has two different interactions. The complexes IL28_receptor and Type_III_IFNR.
Both complexes consist of the same two proteins, IFNLR1 and IL10RB therefore this results
in a duplicated intera…
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I’m struggling with the terms:
GO:0031234
extrinsic component of cytoplasmic side of plasma membrane
The component of a plasma membrane consisting of gene products and protein complexes that…
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Hi,
I was wondering if I could use AutoDock Vina scoring functions to evaluate protein-peptide complexes.
I used Python-based scripts from the AutoDock Vina website just for scoring the complexes.…
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We are working on these kinase-inhibitor complexes.I was looking at the pdb of abl-imatinib(2hyy), I observed that there are four imatinib cofactors (chains A, B, C, D) associated with the protein abl…
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Hallo,
I'm here proposing a wide revision of meiotic recombination initiation complex-related terms.
Thank a lot for your support.
Livia
From PMID: 25324213 , I have extracted the following sent…
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The natural extension part of this extension was moved into the core. My current thinking is that this extension will provide nice methods for building. Proteins, intermolecular complexes, etc. But…
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I can't find this complex in Noctua:
ComplexAc: CPX-566
Even though it has been in our GPI since 2024-05-04
Can you let us know of we are doing anything wrong in the file or is a Noctua load…
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This might be true for a few different examples, but if I try:
```
asap-docking cross-docking --ligands input/lig_0.smi --pdb-file input/NP_722463.1_lig_0.pdb --target ZIKV-NS2B-NS3pro --cache-dir p…
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Currently, ribosome GO:0005840 is_a intracellular non-membrane-bounded organelle
I know this could be debated, but I think that most researchers would call this a complex.
Could we move this unde…