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The initial lungs segmentation method has been provided by the PR [#133](https://github.com/concept-to-clinic/concept-to-clinic/pull/133) due to the issue [#120](https://github.com/concept-to-clinic/c…
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Hi,
I know that the extension in 3D slicer has an Automatic centerline endpoint extraction feature when computing centerline, I am wondering if I there is an option in the script `vmtkcenterlines,`…
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Creating models for a vessel wall is needed for FSI simulations with ALE. I will add an interface to the SV GUI to perform the operations need for this.
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Hi,
Thanks for the great work and the released code! I am very interested in your work and have tried to reimplement the work and the results. During the reimplementation, I encountered an issue an…
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I tried to run the code. The training loop ran smoothly. However, it seems that there is a bug at the test phase
### Reproduce
Clone the repository and ran the main python file
```
python main.p…
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I want to inference MedSam with my data. my data is a list of angiogram images in png format extracted from a DCM file. I tried testing with the google colab medsam.ipynb link you provided, however i …
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I ran your code's first- and second stage and I am confused why I get such worse results than are described in the paper.
I ran the first stage with the `resnest50-528c19ca.pth` and I linked for my…
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Hello, I'm having a bit of trouble making this segmentation tool work with other data.
- Are you using a binary mask of the airways for the distance transform? Do you think applying matlab's bwdis…
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While investigating ValveSoftware/steam-runtime#443, I tried running Artifact (a Vulkan game) with the [libstrangle](https://gitlab.com/torkel104/libstrangle/) frame-rate-limiter module.
One of the…
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I have been training this model and almost every time I get something similar to these results for the first stage and second stage
First stage (fusion, no thresh):
![image](https://user-images.git…