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Needs helper functions to expose a simple XTK-like API to help people getting started.
Class: helpers.X
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Registration crashes:
```
Node: fmriprep_wf.single_subject_10_wf.func_preproc_task_Emotionregulation_run_04_wf.bold_reg_wf.bbreg_wf.bbregister
Working directory: /scratch/users/oesteban/phase2-11…
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http://brainbox.pasteur.fr/mri?url=https://s3.amazonaws.com/fcp-indi-new/data/Projects/ABIDE_Initiative/Outputs/freesurfer/5.1/OHSU_0050163/mri/T1.mgz
the aseg annotation does not show up on this p…
satra updated
7 years ago
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Hi, I'm new to pycortex, and I generated a nii.gz file of a brain image using ITK-SNAP, and tried to use pycortex to this image file. However, I got a error as below:
```
In [1]: from cortex import …
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In nipype/interfaces/freesurfer/utils.py
line 854 should be fixed to actually include the .asc datatype, by substituting:
```
out_datatype = traits.Enum("ico", "tri", "stl", "vtk", "gii", "mgh", "mg…
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biegleux's RecAnalyst is a straight port from his Pascal package by the same name. The API at this point is not particularly nice for PHP applications.
I'm planning on overhauling the API into someth…
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`setup_volume_source_space` has three params that it is not using `subject`, `subjects_dir` and `overwrite`.
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I am attempting to setup mindboggle on Ubuntu 14.04.
I have tried both installation methods (install_script.sh and 'docker'). Here is why neither seems to be working:
**install_script.sh:**
I…
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Hi HappyLeaves,
Do you know if there's something about WiC mod that breaks this parser? I was trying to parse the Clan Masters recs here (for example: http://aoczone.net/viewtopic.php?f=1342&t=12300…
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example:
http://brainbox.pasteur.fr/mri/?url=https://s3.amazonaws.com/fcp-indi/data/Projects/BrainGenomicsSuperstructProject/orig_bids/sub-1000/ses-01/anat/sub-1000_ses-01_T1w.nii.gz&view=sag&slice…
satra updated
7 years ago