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It would be helpful to be able to specify mol2 and pdb molecule files as inputs for the `Component` class
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**Is your feature request related to a problem? Please describe.**
Add linters to molecule test sequences
**Describe the solution you'd like**
Add the following line into `molecule.yml`:
```
li…
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**Describe the bug**
No aromaticity is found in this molecule, `C1=CC2=CC3=CC=C4C=C1C2C34` :
![image](https://user-images.githubusercontent.com/540511/160053197-22ef5207-0a51-44d1-850b-47e10ae2598…
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Expected success with docker as the driver. It appears to be an issue with deciding to use docker or not when in a container.
```
Run cd roles/wavefront_proxy && MOLECULE_COMMAND=/lib/systemd/sy…
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Considering the common confusion around Compose / Compose UI it might be helpful to add a small section to the README explaining the relationship between molecule and Compose UI:
- You don't need…
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`bin/visit -o testdata/silo_hdf5_test_data/multi_curv3d.silo`
Then try to make a Molecule plot of `d`.
VisIt crashes; the debug logs don't seem to contain any useful information.
Should you …
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**User story**
Molecules data can fit into the AnnData model.
index: `molecule_id`
obs: [`cell_id`, `gene_id`]
obsm: [`spatial`, `temporal`, `rgb`]
var: empty
X: empty
I don't think we cu…
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Hi,
I encountered an error when running your code:
Traceback (most recent call last):
File "/data/zhangjunyi/DeeplyTough/deeplytough/scripts/toughm1_benchmark.py", line 6, in
…
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The functions used for displaying molecule images using CDK are currently defined in two places. These should be defined in a module, and imported to the components where they are used rather than bei…
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1) Search for JQ1
2) 2 molecules should be shown:
JQ1(+) http://lincsportal.ccs.miami.edu/signatures/perturbations/40383
and
JQ1 (-) http://lincsportal.ccs.miami.edu/signatures/perturbations/403…