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BLAT-3.7:
https://github.com/easybuilders/easybuild-easyconfigs/blob/develop/easybuild/easyconfigs/b/BLAT/BLAT-3.7-GCC-11.2.0.eb
CAP3:
https://github.com/easybuilders/easybuild-easyconfigs/t…
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rule that will be converted:
```
rule DetectedVariants:
""" Get variants with target rsIDs """
params:
target_bed = load_local(config["table_data"]["target_rsid"]),
hid…
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Hi Enzo!
I hope you are doing well!
Suddently, I am having an issue running FastMLST:
Could you please help me figure out what is going on?
Thanks in advance,
Regards,
Ricardo
error:
…
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Hello,
I want to add data like inheritance pattern from databases like OMIM to my annotations with VEP but they provide us their data in the ".txt" or ".tsv" formmats. How can i convert them to suita…
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hallo thank you for the gci and i am trying to use this for implementing in an analysis and it is giving this error.
```
Used arguments:{'reference': 'maternalpaternal.asm.dip.hap1.p_ctg.fa', 'hifi…
ghost updated
4 months ago
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### Description of the bug
When running the nf-core i get to this step NFCORE_RNASEQ:RNASEQ:FASTQ_ALIGN_HISAT2:HISAT2_ALIGN process within the workflow, a critical error is encountered. The error occ…
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### Setup
Hello,
I am reporting a problem with Biopython 1.81, Python 3.12.1, and operating system MAC.
I would like to convert a fasta file to fastq format using Biopython. This is the command…
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Would it be possible to update the `ipk.py` wrapper script to avoid hard written path related to the ipk.py script location and use what is available in the PATH by default?
Instead of
```
cu…
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https://mp.weixin.qq.com/s/r7kXSeB9bbCqPGLEUYRhsQ
ixxmu updated
8 months ago
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With Collaboratory shutting down at the end of 2023, we need to audit all Collab objects buckets and migrate needed data from Collab to Azure/Cumulus.
- Jared has kindly shared with Bioinfo the [goog…