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Okay I'll lead off by summarising some of things that have been said on Twitter, our email thread, and bobbing around in my own brain:
# Get the basics right
From the conversation we've had so far…
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Physics Abstraction Layer (PAL)
The Physics Abstraction Layer (PAL) provides a unified interface to a number of different physics engines. This enables the use of multiple physics engines within one a…
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**Submitting authors:** @alexzhang0825 @sungg888 @AlysenTownsley @nicolebid
**Repository:** https://github.com/UBC-MDS/Red-Wine-Quality-Prediction
**Report link:** https://ubc-mds.github.io/Red-Wi…
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**What is your question?**
I get pLDDT=nan pTM=nan ipTM=nan with AF-multimer only for large complexes, above 1200 aa more or less
With smaller complexes it runs perfectly OK.
I updated the colabf…
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# Software tools
The software tools listed here are ones that we've found useful for various [Wild Peaches](https://wildpeaches.xyz/) articles, or maybe we think they'll cool once we get around to th…
JanDW updated
11 months ago
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### Context
A user requested [SRP051309](https://www.refine.bio/experiments/SRP051309)
### Problem or idea
SRP051309 is a human RNA-seq data set comprised of 2 samples. No downloadable sample…
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Barron, Alexander TJ, Jenny Huang, Rebecca L. Spang, and Simon DeDeo. 2018. [“Individuals, institutions, and innovation in the debates of the French Revolution.”](https://www.pnas.org/content/115/18/4…
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An extremely important challenge in antibody design is making "no-go" predictions to filter out antibodies that would not be able to bind to the target antigen. Since machine learning has been shown t…
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Hi there! I am reading Chapter 15 and am stuck on understanding the binomial example. To be more specific, for Figure 15.1, I understand that the parameter theta is the parameter of the binomial distr…
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Normal interval linear systems (that is the main functionality of this package currently) are quite useless. In most (prob. all) true applications, you have parametric interval linear systems (PILS, l…