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Hi,
I'm a new user of Voronto, I have no experience with java but I managed to use custom ontologies by saving the obo files using a search in amigo.geneontology. I used several keywords and then sele…
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Trish found that the term neighbourhood wasn't working here:
https://bioportal.bioontology.org/ontologies/47638/?p=terms&conceptid=Amelanotic_Melanoma#visualization
but it is working elsewhere:
https…
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For SNOMED Qualifier Value root concept, if you load only 20 of the 50 concepts in the term neighbourhood mode, it fails to load any of the arcs. If you load all 50, it will succeed appropriately.
ht…
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the prototype that shows mappings between a set of ontologies, where dots are relative to the ontology size and arcs are relative to the number of mappings.
- pull data (fixed because this is overvie…
ghost updated
11 years ago
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go to
http://bioportal.bioontology.org/ontologies/45890?p=terms&jump_to_nav=true&conceptid=GO%3A0071013#details
There are 2 terms listed as values for the "Has Part" relationship
"Prp19 complex" and …
ghost updated
12 years ago
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Ray submitted 4311 on GForge: The default layout for "neighborhood" is terrible if there are more than a few subclasses. For example, look at the visualization of the Snomed Procedure term. The subcla…
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When viewing a visualization, clicking a term and selecting "Mappings" results in an error displayed at the bottom of the browser:
"Could not expand all mappings for "name of term" (name of ontology)"…
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The visualization displayed in the full version of BioMixer does not match what I see in the embed (it only shows the term, and not the higher level terms). I don't have enough SME to know if this is …
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we need a set of drop down combo boxed populated with visko ontology instances from which users can select to build visualization queries.
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Remaining questions/issues for you - once these are done I think we'll be able to call the storylines finished:
1) coastal protection storyline: still missing atmospheric pressure & bathymetry concep…