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hi i am trying to build a expression matrix on galaxy platform but ending up with Fatal error: Exit code 25 () and couldn't able to sort out the error. input data is two abundance estimate output with…
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Hello, I am following the [preprocessing notebook](https://github.com/YosefLab/Cassiopeia/blob/refactor/notebooks/preprocess.ipynb) in the refactor branch with my own GESTALT data. I believe it has be…
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# 🚀 Feature request
I'd like to be able to set a `max_input_tokens` and configure a `truncation_strategy` in `SummarizationPipeline`.
Please let me know if I am missing something that already al…
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Discussions about the [Extensions to find all occurrences of a pattern in a CharSequence](../blob/master/proposals/stdlib/occurrences-of.md) will be held here.
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We currently have a concept for `aligned_sequence` that does not build upon a `sequence`.
# Tasks from [resolution](https://github.com/seqan/seqan3/wiki/Core-Meeting-notes#2020-05-11-marehr)
- [x]…
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Hello there,
I'm using novoplasty to recover some arthropod mitochondrial genomes from RNA-seq (quite trending these days) and I'm encountering that novoplasty tends to extend the poly-A tails from …
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Hi, I‘m trying to find out the highest efficiency sequence for the PE2.
Now, with the DeepPE I've successfully calculated the score of the example input.
Next, I want to calculate the sequences …
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Before we start updating DRAO, we need to update the member ontologies and ensure there are no resulting conflicts. This ticket covers that update.
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/databio/COCOA
Confirm the following by editing ea…
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I'm disappointed the authors don't express an opinion on Access and Benefit Sharing. Closing access to such data would be a disaster for the subject. The authors seem to be saying that they should be …