-
Hi guys
I have used a slightly modified version of your Batch processing script, see below. But I can't work out how to view and manually validate the detections (viewing and listening). It outputs…
-
### Description of the bug
Hi,
The pipeline is executing succesfully until the end but skip annotation processes despite params.annotate_tool is not null. I tried to set it up with 'vep' and 'merg…
-
Hey dudes. New user here.
Followed the https://github.com/eyeonus/Trade-Dangerous/wiki/Setup-Guide and did a `pip install tradedangerous` and `Successfully installed appJar-0.94.0 ijson-3.3.0 mark…
-
Right now mzMine2 can import custom metabolite ID databases in CSV format. This is flexible, but why not use mzTab format explicitly (which I believe has a field for identifications) as the format fo…
-
### Current issues
There are still some issues regarding how namespaces are handled. To wit:
- if you generate manifests using the [`generate-with-watched-namespaces`](https://docs.quarkiverse.io/…
-
Perhaps there is a way that I am not seeing, but it appears that when using ExtractFeature() to try and extract gene regions I can only get mRNA (which includes exons and introns) or CDS/exons (which …
-
Hi!
As far as I am concerned, tb-profiler database contains all the mutations that confer drug resistance listed in the WHO catalogue.
However, the following mutation is not found in the tbdb https:…
-
I'm trying to use the splited data in a study about disagreement and I found out that there are some instances that are mislabeled. I found "0, 0", "1, 1", "0, 0, 0" and "1, 0". For example, the 1850 …
-
When doing the re-iding work I noticed in several places we have documents with empty lists
Ie many omics_processing_set records have gold_sequencing_project_identifiers with a list size of zero.
…
aclum updated
3 weeks ago
-
### User Story
Swagger UI is popular as API documenting tool, the core of the API docs are the OpenAPI spec, could be in json / yaml format, the usual approach is using swagger annotations to "docume…