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https://mp.weixin.qq.com/s/uO5cefJLDfxQ-cOfeB186Q
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/UOShG2gjwfIjxbXV-3ZqXg
ixxmu updated
2 years ago
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I'm using the following code to retrieve the gene expression data for TCGA-LUAD.
```
query Error in method(object) : all assays must have the same nrow and ncol
If I now set `file.type = "norm…
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https://mp.weixin.qq.com/s/OzE6J9DxebsWcmiuvq8fBQ
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/GOhX8XiWGmsmPRTqJ4JWmw
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/SaWjigR5dEaW59HcLSK2YQ
ixxmu updated
2 years ago
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http://purl.obolibrary.org/obo/OBI_0002000 specimen position
http://purl.obolibrary.org/obo/OBI_0002001 specimen integrity
http://purl.obolibrary.org/obo/OBI_0002002 specimen weight
http://purl.obo…
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#### What data file(s) does this issue pertain to?
TCGA RNA-seq merged and collapsed counts and tpm expression matrices.
Because we are not harmonizing TCGA RNA-seq data, I downloaded the dis…
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**Submitting author:** @ColemanRHarris (Coleman Harris)
**Repository:** https://github.com/ColemanRHarris/mxnorm
**Branch with paper.md** (empty if default branch): joss-paper
**Version:** v1.0.2-joss…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/alimahdipour/sciCNV
Confirm the following by edit…