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### Description
Implementation of additional QC parameters. Also make a priority list on these.
- CBF
- GM/WM ratio
- WM/CSF ratio
- Absolute based on population average (Std dev)
…
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### Description
The aim is to **display a brain segmentation overlapped on a T1 MRI image** (both Nifti) using AMI.
The problem is that the **brain segmentation appears shifted from the T1**.
Howev…
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I am using the source code of the lesson 04 (labelmap) example and want two different colored segmentation layers to be shown, but I only get one color to work:
![grafik](https://user-images.githubus…
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```
What steps will reproduce the problem?
1. Load a regular T1.nii.gz
2. Load a fMRI activation spots dataset stats_Z.nii.gz coming from Kevin W. lab
3. Do "equalization" on the stats_Z.nii.gz datase…
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This looks really cool! I noticed that you've used a few datasets from The Cancer Imaging Archive as I'm seeing names like SAROS, LCTSC, CT-ORG and that you provided some conversion steps to prepare e…
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I was working on a preprocessing script to crop the images using the spinal cord masks as the reference and came across a minor discrepancy in the names of the (image, label) pairs in the BIDS-formatt…
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This repository has an impressive number of atlases. I took a quick look at two of these atlases that were of particular interest, and it appears that both may be flipped left-right relative to an MN…
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Noticed a few issues with parrec2nii.
-The help says that scaling=dv is the default but I don't think this is the case. No argument versus dv produce different image values
-With respect to the scal…
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Hi,
I also have a question, do you plan to implement the 3D version to visualize the activation map and decent???
Thanks in advance
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```
231205-20:31:06,743 nipype.workflow INFO:
[MultiProc] Running 1 tasks, and 16 jobs ready. Free memory (GB): 4.00/10.00, Free processors: 0/1.
Currently running:
…
tsalo updated
9 months ago