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With bl2bids, I came across this error using the Cam-Can dataset: `[ERR] Repetition time did not match between the scan's header and the associated JSON metadata file. (code: 12 - REPETITION_TIME_MISM…
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### Title
Browbids - Make the browser run pybids
### Short description and the goals for the OHBM BrainHack
Browsers (typically) don't run Python code. That's a shame, because the neuroimagin…
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I am trying to get regional values, according to the Miccai atlas, for reho and alff. I ran my data through fMRIPrep and then XCPEngine. XCPEngine ran without any errors, but I didn't get out reho or …
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Pybids crashes immediately when called in qsiprep-0.16.x. Even from a shell into qsiprep-0.16.1 using Singularity on a Linux workstation and calling pybids causes an immediate crash.
`$ singularit…
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Even with all my git-annex rotten soul I must say that BIDS must stay away from any filesystem features beyond having directories and files in them. And I think symbolic linking for some hypothetical…
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**Title**
OpenNeuro Demo
**Presentor and Affiliation**
Russell Poldrack (Stanford University)
**Collaborators**
@effigies @yarikoptic @franklin-feingold @oesteban
**Github Link (if applic…
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## Project info
**Title**:
Snakebids: Snakemake + BIDS
**Project leads**:
@akhanf, @tkkuehn
**[Timezone](https://github.com/ohbm/hackathon2021/blob/master/.github/ISSUE_TEMPLATE/handbooks…
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With the constantly growing number of resources about BIDS, I thought it would be useful to organise the "flow" that we expect newcomers to follow -- starting from Googling "what is BIDS" to finding t…
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Trying to develop diffusion BIDS apps is made significantly more difficult by using the FSL bval/bvec format. A format that is dependent on the image axis (and even then only *sometimes*) means that a…
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The primary goal of this project is to create a _lightweight_ library for querying BIDS datasets, using the BIDS schema. While this may ultimately be integrated into `pybids` as a sort of lightweight-…
tsalo updated
2 years ago